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	<title>Andrew J Davies &#187; deep-sea</title>
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	<description>Marine ecology, modelling and computers</description>
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		<title>Habitat Suitability for Cold-Water Corals</title>
		<link>http://www.anddavies.co.uk/marine-ecology/habitat-suitability-for-cold-water-corals/</link>
		<comments>http://www.anddavies.co.uk/marine-ecology/habitat-suitability-for-cold-water-corals/#comments</comments>
		<pubDate>Sat, 16 Apr 2011 08:27:32 +0000</pubDate>
		<dc:creator>Andy</dc:creator>
				<category><![CDATA[Computers]]></category>
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		<description><![CDATA[The framework-forming coral Lophelia pertusa Andrew J. Davies and John Guinotte Cold-water corals are found in all the oceans of the world. Usually below 200 metres, they create structurally complex habitat that gives rise to a unique deep-sea ecosystem in, what otherwise may be a relatively featureless area. Numerous other filter-feeding organisms are found, along [...]]]></description>
			<content:encoded><![CDATA[<div class="mceTemp" style="text-align: center;">
<dl id="attachment_325" class="wp-caption alignright" style="width: 165px;">
<dt class="wp-caption-dt"><img class="size-medium wp-image-325 " title="Lophelia pertusa from NOAA" src="http://www.anddavies.co.uk/wp-content/uploads/2011/04/Lophelia_figure_1_600-221x300.jpg" alt="" width="155" height="210" /></dt>
<dd class="wp-caption-dd">The framework-forming coral <em>Lophelia pertusa</em></dd>
</dl>
</div>
<p><em>Andrew J. Davies and John Guinotte</em></p>
<p>Cold-water corals are found in all the oceans of the world. Usually below 200 metres, they create structurally complex habitat that gives rise to a unique deep-sea ecosystem in, what otherwise may be a relatively featureless area. Numerous other filter-feeding organisms are found, along with fish that may use the coral as a nursery ground. Yet, we don&#8217;t know where many occurrences of cold-water coral are&#8230;.</p>
<p>This is where habitat suitability modelling comes in. By using the best available scientific information and powerful statistical tools, we are able to predict, based on the species environmental requirements where they are likely to occur. Mine and John&#8217;s work, published in PLoS ONE is an important step towards turning habitat suitability modelling into a viable tool for the protection of vulnerable marine ecosystems in the deep sea. This paper represents several years of work, designing and constructing new approaches to allow us to model coral distributions at high resolution. The outputs speak for themselves, with a 1 km resolution, we may finally be able to say to other researchers, go here, you have a good chance of finding coral in this area. Or, we may be able to say, there is a high probability of coral occurrence here, perhaps we could designate this area closed to bottom contact fishing or other exploitation.</p>
<p>Read the abstract below, or download the PDF from either my site or the <a href="http://dx.doi.org/10.1371/journal.pone.0018483" target="_blank">PLoS ONE site</a>.</p>
<h3>Download article</h3>
<a class="downloadlink" href="http://www.anddavies.co.uk/wp-content/plugins/download-monitor/download.php?id=3" title=" downloaded 146 times" >Davies and Guinotte (2011) PLoS ONE (146)</a>
<h3></h3>
<h3>Full citation</h3>
<p><strong>Davies AJ</strong>, Guinotte JM (2011) Global Habitat Suitability for Framework-Forming Cold-Water Corals. PLoS ONE 6(4): e18483. doi:<a href="http://dx.doi.org/10.1371/journal.pone.0018483" target="_blank">10.1371/journal.pone.0018483</a></p>
<h3>Abstract</h3>
<p><span>Predictive habitat models are increasingly being used by conservationists, researchers and governmental bodies to identify vulnerable ecosystems and species&#8217; distributions in areas that have not been sampled. However, in the deep sea, several limitations have restricted the widespread utilisation of this approach. These range from issues with the accuracy of species presences, the lack of reliable absence data and the limited spatial resolution of environmental factors known or thought to control deep-sea species&#8217; distributions. To address these problems, global habitat suitability models have been generated for five species of framework-forming scleractinian corals by taking the best available data and using a novel approach to generate high resolution maps of seafloor conditions. High-resolution global bathymetry was used to resample gridded data from sources such as World Ocean Atlas to produce continuous 30-arc second (~1 km<sup>2</sup>) global grids for environmental, chemical and physical data of the world&#8217;s oceans. The increased area and resolution of the environmental variables resulted in a greater number of coral presence records being incorporated into habitat models and higher accuracy of model predictions. The most important factors in determining cold-water coral habitat suitability were depth, temperature, aragonite saturation state and salinity. Model outputs indicated the majority of suitable coral habitat is likely to occur on the continental shelves and slopes of the Atlantic, South Pacific and Indian Oceans. The North Pacific has very little suitable scleractinian coral habitat. Numerous small scale features (i.e., seamounts), which have not been sampled or identified as having a high probability of supporting cold-water coral habitat were identified in all ocean basins. Field validation of newly identified areas is needed to determine the accuracy of model results, assess the utility of modelling efforts to identify vulnerable marine ecosystems for inclusion in future marine protected areas and reduce coral bycatch by commercial fisheries.<br />
</span></p>
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		<title>Environmental variability at Viosca Knoll</title>
		<link>http://www.anddavies.co.uk/marine-ecology/environmental-variability-at-viosca-knoll/</link>
		<comments>http://www.anddavies.co.uk/marine-ecology/environmental-variability-at-viosca-knoll/#comments</comments>
		<pubDate>Mon, 07 Dec 2009 09:22:21 +0000</pubDate>
		<dc:creator>Andy</dc:creator>
				<category><![CDATA[Marine ecology]]></category>
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		<guid isPermaLink="false">http://www.anddavies.co.uk/?p=177</guid>
		<description><![CDATA[Andrew J. Davies, Gerard C.A. Duineveld, Tjeerd C.E. van Weering, Furu Mienis, Andrea M. Quattrini, Harvey E. Seim, John M. Bane and Steve W. Ross The Lophelia pertusa community at Viosca Knoll (VK826) is the most extensive found to date in the Gulf of Mexico. As part of a multi-disciplinary study, the physical setting of [...]]]></description>
			<content:encoded><![CDATA[<p><em>Andrew J. Davies, Gerard C.A. Duineveld, Tjeerd C.E. van Weering, Furu Mienis, Andrea M. Quattrini, Harvey E. Seim, John M. Bane and Steve W. Ross</em></p>
<p><img class="alignright" title="Lophelia pertusa at VK826" src="http://www.anddavies.co.uk/wp-content/uploads/2009/12/fig3-300x244.jpg" alt="fig3" width="211" height="171" /></p>
<p>The <em>Lophelia pertusa</em> community at Viosca Knoll (VK826) is the most extensive found to date in the Gulf of Mexico. As part of a multi-disciplinary study, the physical setting of this area was described using benthic landers, CTD transects and remotely operated vehicle observations. The site was broadly characterised into three main habitats: (1) dense coral cover that resembles biogenic reef complexes, (2) areas of sediment, and (3) authigenic carbonate blocks with sparse coral and chemosynthetic communities. The coral communities were dominated by <em>L. pertusa</em> but also contained numerous solitary coral species. Over areas that contained <em>L. pertusa</em>, the environmental conditions recorded were similar to those associated with communities in the north-eastern Atlantic, with temperature (8.5–10.6 °C) and salinity (ca. 35) falling within the known species niche for <em>L. pertusa</em>. However, dissolved oxygen concentrations (2.7–2.8 ml l<sup>−1</sup>) and density (<em>σ<sub>Θ</sub></em>, 27.1–27.2 kg m<sup>−3</sup>) were lower and mass fluxes from sediment trap data appeared much higher (4002–4192 mg m<sup>−2</sup> d<sup>−1</sup>). Yet, this species still appears to thrive in this region, suggesting that <em>L. pertusa</em> may not be as limited by lower dissolved oxygen concentrations as previously thought. The VK826 site experienced sustained eastward water flow of 10–30 cm s<sup>−1</sup> over the 5-day measurement period but was also subjected to significant short-term variability in current velocity and direction. In addition, two processes were observed that caused variability in salinity and temperature; the first was consistent with internal waves that caused temperature variations of 0.8 °C over 5–11 h periods. The second was high-frequency variability (20–30 min periods) in temperature recorded only at the ALBEX site. A further pattern observed over the coral habitat was the presence of a 24 h diel vertical migration of zooplankton that may form part of a food chain that eventually reaches the corals. The majority of detailed studies concerning local environmental conditions in <em>L. pertusa</em> habitats have been conducted within the north-eastern Atlantic, limiting most knowledge of the niche of this species to a single part of an ocean basin. Data presented here show that the corals at VK826 are subjected to similar conditions in temperature, salinity, and flow velocity as their counterparts in the north-east Atlantic, although values for dissolved oxygen and density (sigma-theta: <em>σ<sub>Θ</sub></em>) are different. Our data also highlight novel observations of short-term environmental variability in cold-water coral habitat.</p>
<p>Published in Deep Sea Research vol one 57.</p>
<h3>Full Citation</h3>
<p><strong>Davies, A.J.</strong>, Duineveld, G.C.A., van Weering, T.C.E., Mienis, F., Quattrini, A.M., Seim, H.E., Bane, J.M. &amp; Ross, S.W. (2010) &#8220;Short-term environmental variability in cold-water coral habitat at Viosca Knoll, Gulf of Mexico.&#8221; Deep-sea Research Vol 1. 57(2): 199-212.</p>
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		<title>Conference: ICES Deep-sea Symposium</title>
		<link>http://www.anddavies.co.uk/conferences/conference-ices-deep-sea-symposium/</link>
		<comments>http://www.anddavies.co.uk/conferences/conference-ices-deep-sea-symposium/#comments</comments>
		<pubDate>Thu, 21 May 2009 19:45:58 +0000</pubDate>
		<dc:creator>Andy</dc:creator>
				<category><![CDATA[Conferences]]></category>
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		<description><![CDATA[I recently participated in the ICES Deep-sea Symposium on the island of Faial in the Azores. This 4 day meeting ran from 27-30 April and included delegates from all over the world, presenting on subjects from mining to ecology of many deep-sea habitats. The conference was headed: &#8220;Issues confronting the deep oceans: the economic, scientific [...]]]></description>
			<content:encoded><![CDATA[<p><a href="http://www.anddavies.co.uk/wp-content/uploads/2009/05/800px-azoren_141.jpg"><img class="alignright size-thumbnail wp-image-116" style="border: 1px solid black;" title="800px-azoren_141" src="http://www.anddavies.co.uk/wp-content/uploads/2009/05/800px-azoren_141-150x150.jpg" alt="800px-azoren_141" width="150" height="150" /></a>I recently participated in the ICES Deep-sea Symposium on the island of Faial in the Azores. This 4 day meeting ran from 27-30 April and included delegates from all over the world, presenting on subjects from mining to ecology of many deep-sea habitats.</p>
<p>The conference was headed: &#8220;Issues confronting the deep oceans: the economic, scientific and governance challenges and oppotuinites of working in the deep sea&#8221;. I was invited to present in a special session chaired by Jeff Ardron and Liz McLanahan entitled &#8220;Linking deep sea science to international decisions: Vulnerable and ecologically significant areas&#8221;.</p>
<p>My presentation was &#8220;Predicting the distribution of framework forming corals&#8221; and included updates on my new modelling processes and more importantly a new suite of environmental variables at a 30 arc second resolution (1 km). The presentation is available for viewing by clicking below. If you have any questions, or are interested in collaborating don&#8217;t hesitate to <a href="http://www.anddavies.co.uk/contact-me/">contact me</a>.</p>
<p><img class="size-thumbnail wp-image-65 alignleft" title="pdf-logo" src="http://www.anddavies.co.uk/wp-content/uploads/2008/10/pdf-logo-150x150.jpg" alt="pdf-logo" width="25" height="25" />Download the presentation here: <a class="downloadlink" href="http://www.anddavies.co.uk/wp-content/plugins/download-monitor/download.php?id=1" title="Version1 downloaded 458 times" >Davies et al 2009 ICES presentation (458)</a></p>
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		<title>Infra-red video of fish on Hatton Bank</title>
		<link>http://www.anddavies.co.uk/marine-ecology/infra-red-video-of-fish-on-hatton-bank/</link>
		<comments>http://www.anddavies.co.uk/marine-ecology/infra-red-video-of-fish-on-hatton-bank/#comments</comments>
		<pubDate>Sun, 31 Aug 2008 11:15:42 +0000</pubDate>
		<dc:creator>Andy</dc:creator>
				<category><![CDATA[General ecology]]></category>
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		<description><![CDATA[During June/July 2008, I was once again privilaged to join my Dutch colleagues on the RV Pelagia, a magnificent research ship from the Royal Netherlands Institute for Sea Research. The cruise yielded a huge area of multibeam bathymetry, physical oceanography and insights into the biodiversity of the area. One particularly notable attempt was to quantify [...]]]></description>
			<content:encoded><![CDATA[<p>During June/July 2008, I was once again privilaged to join my <a href="http://www.nioz.nl/nioz_nl/c3c5f5df864af3e882ab883c39d95d28.php" target="_blank">Dutch</a> <a href="http://www.nioz.nl/nioz_nl/61e984925e21032e821c4071209cf0c3.php" target="_blank">colleagues</a> on the <a href="http://www.nioz.nl/nioz_nl/386d4f0fee290da945fd7d7b8c235733.php" target="_blank">RV Pelagia</a>, a magnificent research ship from the Royal Netherlands Institute for Sea Research. The cruise yielded a huge area of multibeam bathymetry, physical oceanography and insights into the biodiversity of the area.</p>
<p>One particularly notable attempt was to quantify and identify the fish community in the area, the water depth is nearly 1000 m. We used a timed bait release system mounted on the ALBEX lander and attached a new SAMS infra-red camera.</p>
<p>The results were pretty good. You can see a sneak preview below:</p>
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		<title>Preserving deep-sea natural heritage: Emerging issues in offshore conservation and management</title>
		<link>http://www.anddavies.co.uk/marine-ecology/preserving-deep-sea-natural-heritage-emerging-issues-in-offshore-conservation-and-management/</link>
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		<pubDate>Sun, 06 Apr 2008 18:31:56 +0000</pubDate>
		<dc:creator>Andy</dc:creator>
				<category><![CDATA[Marine ecology]]></category>
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		<description><![CDATA[Andrew J. Davies, J. Murray Roberts, Jason Hall-Spencer Published in Biological Conservation (2007) Human activity in the deep sea is extending ever deeper, with recent research showing that this environment is more sensitive to human and natural impacts than previously thought. Some deep-water fish stocks have collapsed and fishing methods such as bottom trawling have [...]]]></description>
			<content:encoded><![CDATA[<p><em>Andrew J. Davies, J. Murray Roberts, Jason Hall-Spencer<br />
</em><br />
Published in Biological Conservation (2007)<em></em></p>
<p><em></em></p>
<p><a href="http://www.anddavies.co.uk/wp-content/uploads/2008/04/coralfish.jpg"><img class="alignleft alignnone size-thumbnail wp-image-18" style="float: left; border: 0; margin: 6px;" title="Dome-shaped colonies of Lophelia pertusa" src="http://www.anddavies.co.uk/wp-content/uploads/2008/04/coralfish-150x150.jpg" alt="Dome-shaped colonies of Lophelia pertusa" width="150" height="150" /></a>Human activity in the deep sea is extending ever deeper, with recent research showing that this environment is more sensitive to human and natural impacts than previously thought. Some deep-water fish stocks have collapsed and fishing methods such as bottom trawling have raised international concern over the habitat damage they cause. It is likely that in its current form, deep-sea fishing is unsustainable. Diminishing reserves of hydrocarbons in shallow water are pushing exploration and production into deeper waters, which may cause damage to little known deep-sea habitats. The deep sea is also proposed as an environment where anthropogenic carbon dioxide could be stored to minimise the effect of its release into the atmosphere. At the same time, rising atmospheric carbon dioxide levels may be altering the chemical equilibrium of the global ocean by lowering pH. Many countries are now beginning to designate some deep-sea habitats as marine protected areas in measures to reduce the damage caused by fishing and other anthropogenic activities. This review examines these current and emerging issues in deep-sea conservation and discusses conservation status and the designation of protected areas. The enforcement of protected areas using satellite tracking of vessels is discussed and applied to an internationally agreed deep-water conservation area, which aims to protect cold-water coral habitats on the Darwin Mounds in the north east Atlantic Ocean.</p>
<h3>Full citation</h3>
<p><strong><span class="highlightedSearchTerm">Davies</span>, A.J.</strong>, Roberts, J.M. &amp; Hall-Spencer, J. (2007) “Preserving deep-sea natural heritage: Emerging issues in offshore conservation and management” Biological Conservation 138: 299-312.</p>
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